BioCore.NodeView Class Reference

Inheritance diagram for BioCore.NodeView:

Classes
class	Node

Public Member Functions
	NodeView (string[] args)
void	UpdateOverlay ()
void	InitNodes ()
void	UpdateNodes ()
void	Exit ()
	It closes the current form, exits the application, and exits the thread.

Protected Member Functions
override void	Dispose (bool disposing)
	Clean up any resources being used.

Detailed Description

Definition at line 3 of file NodeView.Designer.cs.

Constructor & Destructor Documentation

NodeView()

BioCore.NodeView.NodeView

(

string[]

args

)

Definition at line 45 of file NodeView.cs.

        {
            InitializeComponent();
            //Let's make sure the directories we need for startup exist.
            Console.WriteLine("Reading start up folders.");
            string st = System.IO.Path.GetDirectoryName(Environment.ProcessPath);
            System.IO.Directory.CreateDirectory(st + "/Scripts");
            System.IO.Directory.CreateDirectory(st + "/Functions");
            System.IO.Directory.CreateDirectory(st + "/Tools");
            Init();
            InitNodes();
            App.nodeView = this;
            Shown += async (sender, e) =>
            {
                foreach (string file in args)
                    await OpenImageAsync(file);
            };
            Show();
        }

Member Function Documentation

Dispose()

override void BioCore.NodeView.Dispose ( bool disposing )

protected

Clean up any resources being used.

Parameters

disposing

true if managed resources should be disposed; otherwise, false.

Definition at line 14 of file NodeView.Designer.cs.

        {
            if (disposing && (components != null))
            {
                components.Dispose();
            }
            base.Dispose(disposing);
        }

Exit()

void BioCore.NodeView.Exit

(

)

It closes the current form, exits the application, and exits the thread.

Definition at line 160 of file NodeView.cs.

        {
            this.Close();
            Application.Exit();
            Application.ExitThread();
        }

InitNodes()

void BioCore.NodeView.InitNodes

(

)

It creates a treeview with a root node called "BioImages" and then adds a child node for each BioImage in the Images.images list. Each child node has two child nodes, one for the planes and one for the ROIs

Definition at line 80 of file NodeView.cs.

        {
            treeView.Nodes.Clear();
            TreeNode images = new TreeNode();
            images.Text = "BioImages";
            images.ForeColor = Color.White;
            foreach (BioImage item in Images.images)
            {
                //TreeNode node = new TreeNode();
                Node tree = new Node(item, Node.DataType.image);
 
                Node implanes = new Node(item, Node.DataType.text);
                implanes.Text = "Planes";
 
                foreach (Bitmap buf in item.Buffers)
                {
                    Node plane = new Node(buf, Node.DataType.buf);
                    plane.Text = buf.ID + ", " + buf.Coordinate.ToString();
 
                    implanes.node.Nodes.Add(plane.node);
                }
                tree.node.Nodes.Add(implanes.node);
 
                Node rois = new Node(item, Node.DataType.text);
                rois.Text = "ROI";
 
                foreach (ROI an in item.Annotations)
                {
                    Node roi = new Node(an, Node.DataType.roi);
                    rois.node.Nodes.Add(roi.node);
                }
                tree.node.Nodes.Add(rois.node);
                images.Nodes.Add(tree.node);
            }
            treeView.Nodes.Add(images);
        }

UpdateNodes()

void BioCore.NodeView.UpdateNodes

(

)

If the number of images in the treeview is not the same as the number of images in the Images class, we refresh the whole treeview. If the number of ROIs in the treeview is not the same as the number of ROIs in the image, we refresh the ROIs

Returns

The return type is void.

Definition at line 122 of file NodeView.cs.

        {
            if (Images.images.Count != treeView.Nodes[0].Nodes.Count)
            {
                //If image count is not same as node count we refresh whole tree.
                InitNodes();
                return;
            }
            TreeNode images = treeView.Nodes[0];
            foreach (TreeNode item in images.Nodes)
            {
                //TreeNode node = new TreeNode();
                Node node = (Node)item.Tag;
                BioImage im = (BioImage)node.Object;
 
                TreeNode rois = node.node.Nodes[1];
                if (im.Annotations.Count != rois.Nodes.Count)
                {
                    //If ROI count is not same as node count we refresh annotations.
                    rois.Nodes.Clear();
                    foreach (ROI an in im.Annotations)
                    {
                        Node roi = new Node(an, Node.DataType.roi);
                        rois.Nodes.Add(roi.node);
                    }
                }
                else
                    for (int i = 0; i < im.Annotations.Count; i++)
                    {
                        TreeNode roi = rois.Nodes[i];
                        Node n = (Node)roi.Tag;
                        ROI an = (ROI)n.Object;
                        roi.Text = an.ToString();
                    }
            }
        }

UpdateOverlay()

void BioCore.NodeView.UpdateOverlay

(

)

‍UpdateOverlay() is a function that updates the overlay

Definition at line 72 of file NodeView.cs.

        {
            if (App.viewer != null)
                App.viewer.UpdateOverlay();
        }

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The documentation for this class was generated from the following files:

• BioCore/BioCore/Source/NodeView.cs
• BioCore/BioCore/Source/NodeView.Designer.cs