BioImager.OMERO Class Reference

Inheritance diagram for BioImager.OMERO:

Static Public Member Functions
static Bitmap	PixbufToBitmap (Pixbuf pixbuf)

Public Attributes
List< omero.gateway.model.DatasetData >	datas = new List<omero.gateway.model.DatasetData>()
int	selectedIndex = 0

Protected Member Functions
override void	Dispose (bool disposing)
	Clean up any resources being used.

Properties
int	Progress [get, set]
string	Status [get, set]

Detailed Description

Definition at line 3 of file OMERO.Designer.cs.

Constructor & Destructor Documentation

OMERO()

BioImager.OMERO.OMERO

(

)

Definition at line 42 of file OMERO.cs.

        {
            InitializeComponent();
            Login log = new Login();
            if (log.ShowDialog() == DialogResult.OK)
            {
                BioLib.OMERO.Connect(Login.host, Login.port, Login.username, Login.password);
                Init();
            }
        }

Member Function Documentation

Dispose()

override void BioImager.OMERO.Dispose ( bool disposing )

protected

Clean up any resources being used.

Parameters

disposing

true if managed resources should be disposed; otherwise, false.

Definition at line 14 of file OMERO.Designer.cs.

        {
            if (disposing && (components != null))
            {
                components.Dispose();
            }
            base.Dispose(disposing);
        }

PixbufToBitmap()

static Bitmap BioImager.OMERO.PixbufToBitmap ( Pixbuf pixbuf )

static

Definition at line 140 of file OMERO.cs.

        {
            if (pixbuf == null)
                throw new ArgumentNullException(nameof(pixbuf), "Pixbuf cannot be null.");
 
            // Get Pixbuf properties
            int width = pixbuf.Width;
            int height = pixbuf.Height;
            int rowstride = pixbuf.Rowstride;
            bool hasAlpha = pixbuf.HasAlpha;
            byte[] pixelData = pixbuf.PixelBytes.Data;
 
            // Create a Bitmap
            PixelFormat pixelFormat = hasAlpha ? PixelFormat.Format32bppArgb : PixelFormat.Format24bppRgb;
            Bitmap bitmap = new Bitmap(width, height, pixelFormat);
 
            // Lock the Bitmap's data
            BitmapData bmpData = bitmap.LockBits(
                new Rectangle(0, 0, width, height),
                ImageLockMode.WriteOnly,
                pixelFormat);
 
            // Copy pixel data
            IntPtr bmpPtr = bmpData.Scan0;
            unsafe
            {
                byte* srcPtr = (byte*)pixbuf.Pixels;
                byte* destPtr = (byte*)bmpPtr;
 
                for (int y = 0; y < height; y++)
                {
                    byte* srcRow = srcPtr + y * rowstride;
                    byte* destRow = destPtr + y * bmpData.Stride;
 
                    if (hasAlpha)
                    {
                        for (int x = 0; x < width; x++)
                        {
                            destRow[x * 4 + 0] = srcRow[x * 4 + 2]; // B
                            destRow[x * 4 + 1] = srcRow[x * 4 + 1]; // G
                            destRow[x * 4 + 2] = srcRow[x * 4 + 0]; // R
                            destRow[x * 4 + 3] = srcRow[x * 4 + 3]; // A
                        }
                    }
                    else
                    {
                        for (int x = 0; x < width; x++)
                        {
                            destRow[x * 3 + 0] = srcRow[x * 3 + 2]; // B
                            destRow[x * 3 + 1] = srcRow[x * 3 + 1]; // G
                            destRow[x * 3 + 2] = srcRow[x * 3 + 0]; // R
                        }
                    }
                }
            }
 
            // Unlock and return the Bitmap
            bitmap.UnlockBits(bmpData);
            return bitmap;
        }

Member Data Documentation

datas

List<omero.gateway.model.DatasetData> BioImager.OMERO.datas = new List<omero.gateway.model.DatasetData>()

Definition at line 22 of file OMERO.cs.

selectedIndex

int BioImager.OMERO.selectedIndex = 0

Definition at line 24 of file OMERO.cs.

Property Documentation

Progress

int BioImager.OMERO.Progress

getset

Definition at line 26 of file OMERO.cs.

        {
            get { return progressBar.Value; }
            set 
            { 
                if(value < 100)
                progressBar.Value = value;
 
            }
        }

Status

string BioImager.OMERO.Status

getset

Definition at line 37 of file OMERO.cs.

        {
            get { return statusLabel.Text; }
            set { statusLabel.Text = value; }
        }

---

The documentation for this class was generated from the following files:

• BioImager/Source/OMERO.cs
• BioImager/Source/OMERO.Designer.cs