BioGTK  5.1.1
A .NET library & program for annotating, editing various microscopy imaging formats using Bioformats supported images.
Loading...
Searching...
No Matches
BioGTK.BioImage Member List

This is the complete list of members for BioGTK.BioImage, including all inherited members.

AnnotationsBioGTK.BioImage
AnnotationsBBioGTK.BioImage
AnnotationsGBioGTK.BioImage
AnnotationsRBioGTK.BioImage
AnnotationsRGBBioGTK.BioImage
AutoThreshold(BioImage b, bool updateImageStats)BioGTK.BioImageinlinestatic
AutoThreshold()BioGTK.BioImageinlinestatic
AutoThresholdThread(BioImage b)BioGTK.BioImageinlinestatic
Bake(int rmin, int rmax, int gmin, int gmax, int bmin, int bmax)BioGTK.BioImageinline
Bake(IntRange rf, IntRange gf, IntRange bf)BioGTK.BioImageinline
BChannelBioGTK.BioImage
BioImage(string file)BioGTK.BioImageinline
bitsPerPixelBioGTK.BioImage
BRangeBioGTK.BioImage
BuffersBioGTK.BioImage
ChannelsBioGTK.BioImage
columnsBioGTK.BioImagestatic
CoordinateBioGTK.BioImage
CoordsBioGTK.BioImage
Copy(BioImage b, bool rois)BioGTK.BioImageinlinestatic
Copy(BioImage b)BioGTK.BioImageinlinestatic
Copy(bool rois)BioGTK.BioImageinline
Copy()BioGTK.BioImageinline
CopyInfo(BioImage b, bool copyAnnotations, bool copyChannels)BioGTK.BioImageinlinestatic
Dispose()BioGTK.BioImageinline
ExportROIFolder(string path, string filename)BioGTK.BioImageinlinestatic
ExportROIsCSV(string filename, List< ROI > Annotations)BioGTK.BioImageinlinestatic
ExtractRegionFromTiledTiff(BioImage b, int x, int y, int width, int height, int res)BioGTK.BioImageinlinestatic
fileBioGTK.BioImage
FilenameBioGTK.BioImage
filenameBioGTK.BioImage
FilesToStack(string[] files, int sizeZ, int sizeC, int sizeT)BioGTK.BioImageinlinestatic
filter16BioGTK.BioImagestatic
filter8BioGTK.BioImagestatic
FindFocus(BioImage im, int Channel, int Time)BioGTK.BioImageinlinestatic
FolderToStack(string path, bool tab)BioGTK.BioImageinlinestatic
frameIntervalBioGTK.BioImage
GChannelBioGTK.BioImage
GetAnnotations(ZCT coord)BioGTK.BioImageinline
GetAnnotations(int Z, int C, int T)BioGTK.BioImageinline
GetBitmap(int z, int c, int t)BioGTK.BioImageinline
GetBitmap(ZCT coord)BioGTK.BioImageinline
GetBitmapRGB(int w, int h, PixelFormat px, byte[] bts)BioGTK.BioImageinlinestatic
GetBitMaxValue(int bt)BioGTK.BioImageinlinestatic
GetBitsPerPixel(int bt)BioGTK.BioImageinlinestatic
GetChannelImage(int ind, short s)BioGTK.BioImageinline
GetEmission(ZCT coord, IntRange rf, IntRange gf, IntRange bf)BioGTK.BioImageinline
GetFiltered(ZCT coord, IntRange r, IntRange g, IntRange b)BioGTK.BioImageinline
GetFiltered(int ind, IntRange r, IntRange g, IntRange b)BioGTK.BioImageinline
GetImageByCoord(int z, int c, int t)BioGTK.BioImageinline
GetIndex(int ix, int iy)BioGTK.BioImageinline
GetIndexRGB(int ix, int iy, int index)BioGTK.BioImageinline
GetLevelDownsample(int level)BioGTK.BioImageinline
GetLevelDownsamples()BioGTK.BioImageinline
GetPixelFormat(int rgbChannelCount, int bitsPerPixel)BioGTK.BioImageinlinestatic
GetPixelFormat(int rgbChannelCount, ome.xml.model.enums.PixelType px)BioGTK.BioImageinlinestatic
GetRGBBitmap(ZCT coord, IntRange rf, IntRange gf, IntRange bf)BioGTK.BioImageinline
GetSeriesCount(string file)BioGTK.BioImageinlinestatic
GetTile(BioImage b, ZCT coord, int serie, int tilex, int tiley, int tileSizeX, int tileSizeY)BioGTK.BioImageinlinestatic
GetTile(BioImage b, int index, int serie, int tilex, int tiley, int tileSizeX, int tileSizeY)BioGTK.BioImageinlinestatic
GetUnitPerPixel(int level)BioGTK.BioImageinline
GetValue(ZCTXY coord)BioGTK.BioImageinline
GetValue(ZCT coord, int x, int y)BioGTK.BioImageinline
GetValue(int z, int c, int t, int x, int y)BioGTK.BioImageinline
GetValueRGB(ZCTXY coord, int index)BioGTK.BioImageinline
GetValueRGB(ZCT coord, int x, int y, int RGBindex)BioGTK.BioImageinline
GetValueRGB(int z, int c, int t, int x, int y, int RGBindex)BioGTK.BioImageinline
GRangeBioGTK.BioImage
IDBioGTK.BioImage
ImageCountBioGTK.BioImage
imagesPerSeriesBioGTK.BioImage
ImagesToStack(string[] files, bool tab)BioGTK.BioImageinlinestatic
ImageType enum nameBioGTK.BioImage
ImportROIsCSV(string filename)BioGTK.BioImageinlinestatic
imReadBioGTK.BioImage
Initialize()BioGTK.BioImageinlinestatic
InitializedBioGTK.BioImagestatic
isGroupBioGTK.BioImage
isOME(string file)BioGTK.BioImageinlinestatic
isOMESeries(string file)BioGTK.BioImageinlinestatic
isPyramidalBioGTK.BioImage
isRGBBioGTK.BioImage
isSeriesBioGTK.BioImage
isTiffSeries(string file)BioGTK.BioImageinlinestatic
isTimeBioGTK.BioImage
LabelResolutionBioGTK.BioImage
LevelBioGTK.BioImage
LevelFromResolution(double Resolution)BioGTK.BioImageinline
littleEndianBioGTK.BioImage
LoadingBioGTK.BioImage
loadTimeMSBioGTK.BioImage
loadTimeTicksBioGTK.BioImage
MacroResolutionBioGTK.BioImage
MergeChannels(BioImage b2, BioImage b)BioGTK.BioImageinlinestatic
MergeChannels(string bname, string b2name)BioGTK.BioImageinlinestatic
MergeT(BioImage b)BioGTK.BioImageinlinestatic
MergeZ(BioImage b)BioGTK.BioImageinlinestatic
NewLineBioGTK.BioImagestatic
Open(string file)BioGTK.BioImageinlinestatic
Open(string[] files)BioGTK.BioImageinlinestatic
OpenAsync(string file, bool OME, bool newtab, bool images, int series)BioGTK.BioImageinlinestatic
OpenAsync(string[] files, bool OME, bool tab, bool images)BioGTK.BioImageinlinestatic
OpenFile(string file)BioGTK.BioImageinlinestatic
OpenFile(string file, bool tab)BioGTK.BioImageinlinestatic
OpenFile(string file, int series, bool tab, bool addToImages)BioGTK.BioImageinlinestatic
OpenFile(string file, int series, bool tab, bool addToImages, bool tile, int tileX, int tileY, int tileSizeX, int tileSizeY)BioGTK.BioImageinlinestatic
OpenOME(string file, bool tab)BioGTK.BioImageinlinestatic
OpenOME(string file, int serie)BioGTK.BioImageinlinestatic
OpenOME(string file, int serie, bool tab, bool addToImages, bool tile, int tilex, int tiley, int tileSizeX, int tileSizeY, bool useOpenSlide=true)BioGTK.BioImageinlinestatic
OpenOMEROIs(string file, int series)BioGTK.BioImageinlinestatic
OpenOMESeries(string file, bool tab, bool addToImages)BioGTK.BioImageinlinestatic
OpenSeries(string file, bool tab)BioGTK.BioImageinlinestatic
OpenSlideBaseBioGTK.BioImage
openSlideImageBioGTK.BioImage
OpenVips(BioImage b, int pagecount)BioGTK.BioImageinlinestatic
OpenXML(string file)BioGTK.BioImageinlinestatic
operator*(BioImage a, float b)BioGTK.BioImageinlinestatic
operator*(BioImage a, ColorS b)BioGTK.BioImageinlinestatic
operator+(BioImage a, float b)BioGTK.BioImageinlinestatic
operator+(BioImage a, ColorS b)BioGTK.BioImageinlinestatic
operator-(BioImage a, float b)BioGTK.BioImageinlinestatic
operator-(BioImage a, ColorS b)BioGTK.BioImageinlinestatic
operator/(BioImage a, float b)BioGTK.BioImageinlinestatic
operator/(BioImage a, ColorS b)BioGTK.BioImageinlinestatic
PhysicalSizeXBioGTK.BioImage
PhysicalSizeYBioGTK.BioImage
PhysicalSizeZBioGTK.BioImage
PlanesBioGTK.BioImagestatic
PlateBioGTK.BioImage
progFileBioGTK.BioImagestatic
progressValueBioGTK.BioImagestatic
PyramidalOriginBioGTK.BioImage
PyramidalSizeBioGTK.BioImage
RChannelBioGTK.BioImage
ResolutionBioGTK.BioImage
ResolutionsBioGTK.BioImage
RGBChannelCountBioGTK.BioImage
rgbChannelsBioGTK.BioImage
ROIsToString(List< ROI > Annotations)BioGTK.BioImageinlinestatic
ROIToString(ROI an)BioGTK.BioImageinlinestatic
RotateFlip(AForge.RotateFlipType rot)BioGTK.BioImageinline
RRangeBioGTK.BioImage
SaveAsync(string file, string id, int serie, bool ome)BioGTK.BioImageinlinestatic
SaveFile(string file, string ID)BioGTK.BioImageinlinestatic
SaveOME(string file, string ID)BioGTK.BioImageinlinestatic
SaveOME(BioImage image, string file)BioGTK.BioImageinlinestatic
SaveOMEPyramidal(BioImage[] bms, string file, Enums.ForeignTiffCompression compression, int compressionLevel)BioGTK.BioImageinlinestatic
SaveOMESeries(BioImage[] files, string f, bool planes)BioGTK.BioImageinlinestatic
SavePyramidalAsync(BioImage[] imgs, string file, Enums.ForeignTiffCompression com, int compLevel)BioGTK.BioImageinlinestatic
SaveSeries(string[] IDs, string file)BioGTK.BioImageinlinestatic
SaveSeriesAsync(BioImage[] imgs, string file, bool ome)BioGTK.BioImageinlinestatic
scriptBioGTK.BioImage
selectedBioGTK.BioImage
SelectedBufferBioGTK.BioImage
seriesBioGTK.BioImage
seriesCountBioGTK.BioImage
SetValue(ZCTXY coord, ushort value)BioGTK.BioImageinline
SetValue(int x, int y, int ind, ushort value)BioGTK.BioImageinline
SetValue(int x, int y, ZCT coord, ushort value)BioGTK.BioImageinline
SetValueRGB(ZCTXY coord, int RGBindex, ushort value)BioGTK.BioImageinline
SizeCBioGTK.BioImage
SizeTBioGTK.BioImage
SizeXBioGTK.BioImage
SizeYBioGTK.BioImage
SizeZBioGTK.BioImage
SlideBaseBioGTK.BioImage
SplitChannels()BioGTK.BioImageinline
SplitChannels(BioImage bb)BioGTK.BioImageinlinestatic
SplitChannels(string name)BioGTK.BioImageinlinestatic
StackThreshold(bool bit16)BioGTK.BioImageinline
StageSizeXBioGTK.BioImage
StageSizeYBioGTK.BioImage
StageSizeZBioGTK.BioImage
StatisticsBioGTK.BioImage
statusBioGTK.BioImagestatic
StringToROI(string sts)BioGTK.BioImageinlinestatic
Substack(BioImage orig, int ser, int zs, int ze, int cs, int ce, int ts, int te)BioGTK.BioImageinlinestatic
swatchBioGTK.BioImagestatic
TagBioGTK.BioImage
tifReadBioGTK.BioImage
To16Bit()BioGTK.BioImageinline
To24Bit()BioGTK.BioImageinline
To32Bit()BioGTK.BioImageinline
To48Bit()BioGTK.BioImageinline
To8Bit()BioGTK.BioImageinline
ToImageSizeX(double d)BioGTK.BioImageinline
ToImageSizeY(double d)BioGTK.BioImageinline
ToImageSpace(PointD p)BioGTK.BioImageinline
ToImageSpace(List< PointD > p)BioGTK.BioImageinline
ToImageSpace(PointF[] p)BioGTK.BioImageinline
ToImageSpace(RectangleD p)BioGTK.BioImageinline
ToImageSpaceX(double x)BioGTK.BioImageinline
ToImageSpaceY(double y)BioGTK.BioImageinline
ToStageSpace(PointD p)BioGTK.BioImageinline
ToStageSpace(PointD p, int resolution)BioGTK.BioImageinline
ToStageSpace(PointD p, double physicalSizeX, double physicalSizeY, double volumeX, double volumeY)BioGTK.BioImageinlinestatic
ToStageSpace(RectangleD p)BioGTK.BioImageinline
ToStageSpace(RectangleD p, double physicalSizeX, double physicalSizeY, double volumeX, double volumeY)BioGTK.BioImageinlinestatic
ToStageSpace(PointD[] p)BioGTK.BioImageinline
ToStageSpace(PointD[] p, double physicalSizeX, double physicalSizeY, double volumeX, double volumeY)BioGTK.BioImageinlinestatic
ToString()BioGTK.BioImageinline
TypeBioGTK.BioImage
Update(BioImage b)BioGTK.BioImageinlinestatic
Update()BioGTK.BioImageinline
UpdateBuffersPyramidal()BioGTK.BioImageinline
UpdateCoords()BioGTK.BioImageinline
UpdateCoords(int sz, int sc, int st)BioGTK.BioImageinline
UpdateCoords(int sz, int sc, int st, string order)BioGTK.BioImageinline
vipPagesBioGTK.BioImage
VipsSupport(string file)BioGTK.BioImageinlinestatic
VolumeBioGTK.BioImage
watchBioGTK.BioImage